Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 FZD10-202ENST00000539839 3282 ntBASIC17.67■□□□□ 0.42
RNF6Q9Y252 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF6Q9Y252 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF6Q9Y252 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF6Q9Y252 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF6Q9Y252 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF6Q9Y252 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF6Q9Y252 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF6Q9Y252 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF6Q9Y252 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 TMPOP1-202ENST00000424642 1267 ntBASIC17.66■□□□□ 0.42
RNF6Q9Y252 NUDT16P1-203ENST00000513809 620 ntBASIC17.66■□□□□ 0.42
RNF6Q9Y252 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF6Q9Y252 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF6Q9Y252 HCG11-201ENST00000411553 5696 ntBASIC17.66■□□□□ 0.42
RNF6Q9Y252 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF6Q9Y252 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RNF6Q9Y252 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF6Q9Y252 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF6Q9Y252 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF6Q9Y252 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF6Q9Y252 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF6Q9Y252 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF6Q9Y252 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF6Q9Y252 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF6Q9Y252 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF6Q9Y252 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF6Q9Y252 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RNF6Q9Y252 RBM17P1-201ENST00000453646 1190 ntBASIC17.65■□□□□ 0.42
RNF6Q9Y252 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF6Q9Y252 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF6Q9Y252 NOC2LP1-202ENST00000452600 2235 ntBASIC17.65■□□□□ 0.42
RNF6Q9Y252 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.65■□□□□ 0.42
RNF6Q9Y252 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF6Q9Y252 AP000997.3-201ENST00000623333 2250 ntBASIC17.65■□□□□ 0.42
RNF6Q9Y252 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF6Q9Y252 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF6Q9Y252 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF6Q9Y252 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF6Q9Y252 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF6Q9Y252 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RNF6Q9Y252 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.64■□□□□ 0.42
RNF6Q9Y252 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF6Q9Y252 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 RN7SL850P-201ENST00000579959 291 ntBASIC17.64■□□□□ 0.41
RNF6Q9Y252 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 REXO1L10P-201ENST00000615707 1290 ntBASIC17.64■□□□□ 0.41
RNF6Q9Y252 MIR6786-201ENST00000616843 113 ntBASIC17.64■□□□□ 0.41
RNF6Q9Y252 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RNF6Q9Y252 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF6Q9Y252 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms