Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 IKBKGP1-201ENST00000612193 1073 ntBASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN2Q9UHD9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.83■□□□□ 0.13
UBQLN2Q9UHD9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
UBQLN2Q9UHD9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBQLN2Q9UHD9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
UBQLN2Q9UHD9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
UBQLN2Q9UHD9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 AC137761.2-201ENST00000561729 223 ntBASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 AC145350.3-201ENST00000569033 163 ntBASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 AC022517.1-201ENST00000592429 346 ntBASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 AC011676.5-201ENST00000624864 2660 ntBASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 AL596257.1-201ENST00000641463 2694 ntBASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.83■□□□□ 0.12
UBQLN2Q9UHD9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 KRT19P1-201ENST00000405746 1186 ntBASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 AC016769.1-201ENST00000409132 1010 ntBASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms