Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.18■□□□□ 0.5
CPNE7Q9UBL6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE7Q9UBL6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.18■□□□□ 0.5
CPNE7Q9UBL6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.18■□□□□ 0.5
CPNE7Q9UBL6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.18■□□□□ 0.5
CPNE7Q9UBL6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE7Q9UBL6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE7Q9UBL6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CPNE7Q9UBL6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE7Q9UBL6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE7Q9UBL6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE7Q9UBL6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE7Q9UBL6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE7Q9UBL6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 MIR564-202ENST00000385049 94 ntBASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 RASA4DP-201ENST00000460726 1199 ntBASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 SEC1P-202ENST00000473944 940 ntBASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 FAM86EP-206ENST00000510506 987 ntBASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPNE7Q9UBL6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 KRT18P23-201ENST00000435622 1283 ntBASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 HYMAI.1-201ENST00000620949 238 ntBASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPNE7Q9UBL6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 KRT8P7-201ENST00000533003 1432 ntBASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 PCED1CP-201ENST00000419887 785 ntBASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 AP000550.4-202ENST00000639755 178 ntBASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 AC068587.9-201ENST00000641814 219 ntBASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 AL161938.1-201ENST00000569833 2180 ntBASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 AC116562.4-201ENST00000641316 2276 ntBASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 LINC01311-201ENST00000565162 1445 ntBASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.15■□□□□ 0.5
CPNE7Q9UBL6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms