Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 MYC-208ENST00000641036 567 ntBASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.71■□□□□ 0.43
PRDM9Q9NQV7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
PRDM9Q9NQV7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 TERF1P1-201ENST00000311003 1181 ntBASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 AC005521.1-201ENST00000393351 872 ntBASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 ATP5G1P1-201ENST00000448724 379 ntBASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 KRT18P41-201ENST00000518924 1277 ntBASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRDM9Q9NQV7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 MTMR9LP-203ENST00000426597 1545 ntBASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 AL020996.1-203ENST00000536896 2307 ntBASIC17.69■□□□□ 0.42
PRDM9Q9NQV7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 RCC2P3-201ENST00000418112 1537 ntBASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 AC010203.1-204ENST00000548782 407 ntBASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 MIR4674-201ENST00000582457 87 ntBASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 AC092865.7-201ENST00000641832 219 ntBASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 AC093503.3-201ENST00000624917 2352 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms