Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.71■□□□□ 0.27
KIAA1549Q9HCM3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
KIAA1549Q9HCM3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
KIAA1549Q9HCM3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.71■□□□□ 0.26
KIAA1549Q9HCM3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.7■□□□□ 0.26
KIAA1549Q9HCM3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 HOMER2P1-201ENST00000455653 964 ntBASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 AC034236.2-201ENST00000606662 1610 ntBASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 AC098818.2-201ENST00000564925 2320 ntBASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 RASA4DP-201ENST00000460726 1199 ntBASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 AC140113.3-201ENST00000605663 199 ntBASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.69■□□□□ 0.26
KIAA1549Q9HCM3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 DUSP5P1-201ENST00000441325 1139 ntBASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 AC008556.1-201ENST00000610908 2040 ntBASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 AL157888.1-201ENST00000631930 593 ntBASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 AC018445.3-201ENST00000624177 1945 ntBASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 BX323043.1-201ENST00000641006 1765 ntBASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KIAA1549Q9HCM3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms