Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.65■□□□□ 0.26
C12orf49Q9H741 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C12orf49Q9H741 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.65■□□□□ 0.26
C12orf49Q9H741 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.65■□□□□ 0.26
C12orf49Q9H741 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.65■□□□□ 0.26
C12orf49Q9H741 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
C12orf49Q9H741 AC011558.1-201ENST00000623459 338 ntBASIC16.65■□□□□ 0.26
C12orf49Q9H741 AL512353.2-201ENST00000448759 1962 ntBASIC16.65■□□□□ 0.26
C12orf49Q9H741 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C12orf49Q9H741 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C12orf49Q9H741 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C12orf49Q9H741 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C12orf49Q9H741 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C12orf49Q9H741 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C12orf49Q9H741 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C12orf49Q9H741 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
C12orf49Q9H741 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.64■□□□□ 0.25
C12orf49Q9H741 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.64■□□□□ 0.25
C12orf49Q9H741 RNF152P1-201ENST00000397754 604 ntBASIC16.64■□□□□ 0.25
C12orf49Q9H741 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.64■□□□□ 0.25
C12orf49Q9H741 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
C12orf49Q9H741 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.64■□□□□ 0.25
C12orf49Q9H741 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
C12orf49Q9H741 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.64■□□□□ 0.25
C12orf49Q9H741 NTF6B-201ENST00000591913 560 ntBASIC16.64■□□□□ 0.25
C12orf49Q9H741 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
C12orf49Q9H741 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.64■□□□□ 0.25
C12orf49Q9H741 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
C12orf49Q9H741 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.64■□□□□ 0.25
C12orf49Q9H741 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C12orf49Q9H741 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.64■□□□□ 0.25
C12orf49Q9H741 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.64■□□□□ 0.25
C12orf49Q9H741 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C12orf49Q9H741 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C12orf49Q9H741 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.63■□□□□ 0.25
C12orf49Q9H741 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
C12orf49Q9H741 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
C12orf49Q9H741 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C12orf49Q9H741 TSPY5P-201ENST00000426936 936 ntBASIC16.63■□□□□ 0.25
C12orf49Q9H741 AC022616.7-201ENST00000525383 220 ntBASIC16.63■□□□□ 0.25
C12orf49Q9H741 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.63■□□□□ 0.25
C12orf49Q9H741 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.63■□□□□ 0.25
C12orf49Q9H741 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C12orf49Q9H741 MIR3180-5-201ENST00000583743 153 ntBASIC16.63■□□□□ 0.25
C12orf49Q9H741 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
C12orf49Q9H741 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.63■□□□□ 0.25
C12orf49Q9H741 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C12orf49Q9H741 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
C12orf49Q9H741 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
C12orf49Q9H741 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.63■□□□□ 0.25
C12orf49Q9H741 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C12orf49Q9H741 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C12orf49Q9H741 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C12orf49Q9H741 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C12orf49Q9H741 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
C12orf49Q9H741 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
C12orf49Q9H741 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.63■□□□□ 0.25
C12orf49Q9H741 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf49Q9H741 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf49Q9H741 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf49Q9H741 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf49Q9H741 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf49Q9H741 AP000523.1-201ENST00000398242 1049 ntBASIC16.62■□□□□ 0.25
C12orf49Q9H741 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 AL441883.1-201ENST00000566170 1045 ntBASIC16.62■□□□□ 0.25
C12orf49Q9H741 LINC01238-205ENST00000567549 1107 ntBASIC16.62■□□□□ 0.25
C12orf49Q9H741 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 AC087388.1-201ENST00000571370 1112 ntBASIC16.62■□□□□ 0.25
C12orf49Q9H741 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 AL031432.5-201ENST00000641059 760 ntBASIC16.62■□□□□ 0.25
C12orf49Q9H741 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf49Q9H741 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf49Q9H741 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C12orf49Q9H741 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
C12orf49Q9H741 AC008556.1-201ENST00000610908 2040 ntBASIC16.62■□□□□ 0.25
C12orf49Q9H741 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms