Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.92■□□□□ 0.46
PIF1Q9H611 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PIF1Q9H611 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PIF1Q9H611 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PIF1Q9H611 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PIF1Q9H611 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PIF1Q9H611 ABALON-201ENST00000629058 1903 ntBASIC17.92■□□□□ 0.46
PIF1Q9H611 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PIF1Q9H611 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PIF1Q9H611 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PIF1Q9H611 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PIF1Q9H611 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.91■□□□□ 0.46
PIF1Q9H611 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.91■□□□□ 0.46
PIF1Q9H611 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.91■□□□□ 0.46
PIF1Q9H611 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.91■□□□□ 0.46
PIF1Q9H611 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.91■□□□□ 0.46
PIF1Q9H611 HLA-B-256ENST00000639848 1089 ntBASIC17.91■□□□□ 0.46
PIF1Q9H611 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.91■□□□□ 0.46
PIF1Q9H611 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.91■□□□□ 0.46
PIF1Q9H611 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PIF1Q9H611 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.91■□□□□ 0.46
PIF1Q9H611 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.91■□□□□ 0.46
PIF1Q9H611 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PIF1Q9H611 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PIF1Q9H611 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.9■□□□□ 0.46
PIF1Q9H611 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PIF1Q9H611 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
PIF1Q9H611 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PIF1Q9H611 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PIF1Q9H611 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.9■□□□□ 0.46
PIF1Q9H611 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 AL355802.2-201ENST00000402069 882 ntBASIC17.9■□□□□ 0.46
PIF1Q9H611 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.9■□□□□ 0.46
PIF1Q9H611 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.9■□□□□ 0.46
PIF1Q9H611 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.9■□□□□ 0.46
PIF1Q9H611 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.9■□□□□ 0.46
PIF1Q9H611 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.9■□□□□ 0.46
PIF1Q9H611 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 AC120498.8-201ENST00000614275 531 ntBASIC17.9■□□□□ 0.46
PIF1Q9H611 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.9■□□□□ 0.46
PIF1Q9H611 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.9■□□□□ 0.46
PIF1Q9H611 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PIF1Q9H611 AP000997.3-201ENST00000623333 2250 ntBASIC17.89■□□□□ 0.46
PIF1Q9H611 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PIF1Q9H611 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PIF1Q9H611 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
PIF1Q9H611 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PIF1Q9H611 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
PIF1Q9H611 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PIF1Q9H611 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.89■□□□□ 0.45
PIF1Q9H611 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PIF1Q9H611 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PIF1Q9H611 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.89■□□□□ 0.45
PIF1Q9H611 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
PIF1Q9H611 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PIF1Q9H611 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.89■□□□□ 0.45
PIF1Q9H611 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.89■□□□□ 0.45
PIF1Q9H611 PNMA6B-201ENST00000538162 1200 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms