Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 AC006333.2-201ENST00000607957 2099 ntBASIC20.25■□□□□ 0.83
NXF3Q9H4D5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.25■□□□□ 0.83
NXF3Q9H4D5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 AC010240.3-201ENST00000607688 395 ntBASIC20.24■□□□□ 0.83
NXF3Q9H4D5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.24■□□□□ 0.83
NXF3Q9H4D5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.24■□□□□ 0.83
NXF3Q9H4D5 AC034236.2-201ENST00000606662 1610 ntBASIC20.24■□□□□ 0.83
NXF3Q9H4D5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 HEIH-201ENST00000623091 1652 ntBASIC20.23■□□□□ 0.83
NXF3Q9H4D5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 AL645929.1-201ENST00000420084 975 ntBASIC20.23■□□□□ 0.83
NXF3Q9H4D5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 KRT8P7-201ENST00000533003 1432 ntBASIC20.23■□□□□ 0.83
NXF3Q9H4D5 AC104390.1-201ENST00000555663 520 ntBASIC20.23■□□□□ 0.83
NXF3Q9H4D5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.23■□□□□ 0.83
NXF3Q9H4D5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NXF3Q9H4D5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 AC069148.1-201ENST00000608741 768 ntBASIC20.22■□□□□ 0.83
NXF3Q9H4D5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 MTMR9LP-203ENST00000426597 1545 ntBASIC20.22■□□□□ 0.83
NXF3Q9H4D5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NXF3Q9H4D5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 AL357033.4-201ENST00000617703 1807 ntBASIC20.21■□□□□ 0.83
NXF3Q9H4D5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms