Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.83■□□□□ 0.44
SPTBN4Q9H254 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 AP002414.3-201ENST00000589352 1468 ntBASIC17.82■□□□□ 0.44
SPTBN4Q9H254 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.82■□□□□ 0.44
SPTBN4Q9H254 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 FP700111.2-201ENST00000619190 1892 ntBASIC17.81■□□□□ 0.44
SPTBN4Q9H254 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 AL356309.3-201ENST00000624132 1934 ntBASIC17.81■□□□□ 0.44
SPTBN4Q9H254 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 AC108751.1-201ENST00000490852 363 ntBASIC17.81■□□□□ 0.44
SPTBN4Q9H254 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 TP73-AS1-210ENST00000637775 1455 ntBASIC17.81■□□□□ 0.44
SPTBN4Q9H254 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.81■□□□□ 0.44
SPTBN4Q9H254 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.8■□□□□ 0.44
SPTBN4Q9H254 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 AC004449.1-201ENST00000564240 433 ntBASIC17.8■□□□□ 0.44
SPTBN4Q9H254 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.8■□□□□ 0.44
SPTBN4Q9H254 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 ABCD1P5-201ENST00000445663 754 ntBASIC17.79■□□□□ 0.44
SPTBN4Q9H254 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 PLK5-205ENST00000642079 1969 ntBASIC17.79■□□□□ 0.44
SPTBN4Q9H254 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SPTBN4Q9H254 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms