Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 AC005332.7-201ENST00000614046 2005 ntBASIC19.42■□□□□ 0.7
RNF38Q9H0F5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 MIR3917-201ENST00000580971 93 ntBASIC19.42■□□□□ 0.7
RNF38Q9H0F5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.42■□□□□ 0.7
RNF38Q9H0F5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 AL049812.1-201ENST00000432563 2267 ntBASIC19.42■□□□□ 0.7
RNF38Q9H0F5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF38Q9H0F5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 AC093458.2-201ENST00000623150 629 ntBASIC19.41■□□□□ 0.7
RNF38Q9H0F5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 AL161938.1-201ENST00000569833 2180 ntBASIC19.41■□□□□ 0.7
RNF38Q9H0F5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RNF38Q9H0F5 HOXB1-202ENST00000577092 1414 ntBASIC19.41■□□□□ 0.7
RNF38Q9H0F5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 AC116562.4-201ENST00000641316 2276 ntBASIC19.4■□□□□ 0.7
RNF38Q9H0F5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 AC104390.1-201ENST00000555663 520 ntBASIC19.4■□□□□ 0.7
RNF38Q9H0F5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 AC006333.2-201ENST00000607957 2099 ntBASIC19.4■□□□□ 0.7
RNF38Q9H0F5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF38Q9H0F5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 KRT8P7-201ENST00000533003 1432 ntBASIC19.39■□□□□ 0.69
RNF38Q9H0F5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms