Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM2Q9C040 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM2Q9C040 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM2Q9C040 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM2Q9C040 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM2Q9C040 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM2Q9C040 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIM2Q9C040 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM2Q9C040 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.27■□□□□ 0.35
TRIM2Q9C040 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM2Q9C040 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM2Q9C040 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRIM2Q9C040 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.27■□□□□ 0.35
TRIM2Q9C040 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM2Q9C040 HTR7P1-202ENST00000624664 4411 ntBASIC17.27■□□□□ 0.35
TRIM2Q9C040 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM2Q9C040 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM2Q9C040 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM2Q9C040 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM2Q9C040 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRIM2Q9C040 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM2Q9C040 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM2Q9C040 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM2Q9C040 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM2Q9C040 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 AC011298.2-201ENST00000617989 482 ntBASIC17.26■□□□□ 0.35
TRIM2Q9C040 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 KRT8P3-201ENST00000519669 1449 ntBASIC17.26■□□□□ 0.35
TRIM2Q9C040 AL135905.2-201ENST00000584934 1404 ntBASIC17.26■□□□□ 0.35
TRIM2Q9C040 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRIM2Q9C040 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 HEIH-201ENST00000623091 1652 ntBASIC17.26■□□□□ 0.35
TRIM2Q9C040 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM2Q9C040 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM2Q9C040 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRIM2Q9C040 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM2Q9C040 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM2Q9C040 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM2Q9C040 AC090164.3-201ENST00000610780 2143 ntBASIC17.24■□□□□ 0.35
TRIM2Q9C040 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM2Q9C040 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM2Q9C040 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.24■□□□□ 0.35
TRIM2Q9C040 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM2Q9C040 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM2Q9C040 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TRIM2Q9C040 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms