Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 TSPY12P-201ENST00000421279 868 ntBASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 VENTXP7-201ENST00000475503 772 ntBASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 AC009065.1-201ENST00000564055 1225 ntBASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 AP005901.3-202ENST00000581653 237 ntBASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 AC004263.2-201ENST00000617183 678 ntBASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 AC068587.9-201ENST00000641814 219 ntBASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 NSUN5P1-202ENST00000421140 1535 ntBASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 NSUN5P2-203ENST00000457352 1529 ntBASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 AC125437.2-201ENST00000625180 2167 ntBASIC24.3■■□□□ 1.48
PCDH11XQ9BZA7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 SAPCD2P3-201ENST00000455031 850 ntBASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDH11XQ9BZA7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 FP475955.4-201ENST00000623131 1990 ntBASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 REXO1L6P-202ENST00000619970 1078 ntBASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH11XQ9BZA7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDH11XQ9BZA7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 AL353692.3-201ENST00000407031 1396 ntBASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 HLA-A-201ENST00000376802 1334 ntBASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 NUS1P2-201ENST00000417358 873 ntBASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 AC091607.1-201ENST00000490318 1060 ntBASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 AC079776.4-201ENST00000511039 504 ntBASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC24.26■■□□□ 1.47
PCDH11XQ9BZA7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms