Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 AC093677.2-201ENST00000600169 1863 ntBASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RSPO3Q9BXY4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO3Q9BXY4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 AC116562.2-201ENST00000507042 360 ntBASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 CD177P1-201ENST00000606252 935 ntBASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 AL162741.1-201ENST00000565563 1558 ntBASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO3Q9BXY4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 AC099343.3-201ENST00000605834 2503 ntBASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 AC008764.6-201ENST00000595909 2069 ntBASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.21■□□□□ 0.35
RSPO3Q9BXY4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms