Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 AL354751.1-201ENST00000412768 1863 ntBASIC21.2■□□□□ 0.98
CCDC94Q9BW85 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.2■□□□□ 0.98
CCDC94Q9BW85 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC94Q9BW85 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 AC073912.3-201ENST00000624414 853 ntBASIC21.19■□□□□ 0.98
CCDC94Q9BW85 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC94Q9BW85 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.18■□□□□ 0.98
CCDC94Q9BW85 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 BX088651.1-201ENST00000540551 451 ntBASIC21.18■□□□□ 0.98
CCDC94Q9BW85 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 AC131212.4-201ENST00000623606 975 ntBASIC21.18■□□□□ 0.98
CCDC94Q9BW85 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC94Q9BW85 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC94Q9BW85 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC94Q9BW85 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC94Q9BW85 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC94Q9BW85 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC94Q9BW85 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CCDC94Q9BW85 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC94Q9BW85 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC94Q9BW85 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC94Q9BW85 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC94Q9BW85 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC94Q9BW85 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC94Q9BW85 AC026271.3-201ENST00000571884 352 ntBASIC21.17■□□□□ 0.98
CCDC94Q9BW85 REXO1L10P-201ENST00000615707 1290 ntBASIC21.17■□□□□ 0.98
CCDC94Q9BW85 REXO1L12P-201ENST00000622156 912 ntBASIC21.17■□□□□ 0.98
CCDC94Q9BW85 HLA-A-209ENST00000638375 975 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms