Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.67■□□□□ 0.74
SMOQ99835 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.67■□□□□ 0.74
SMOQ99835 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMOQ99835 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMOQ99835 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.67■□□□□ 0.74
SMOQ99835 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMOQ99835 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.67■□□□□ 0.74
SMOQ99835 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.67■□□□□ 0.74
SMOQ99835 HOXB1-202ENST00000577092 1414 ntBASIC19.67■□□□□ 0.74
SMOQ99835 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.67■□□□□ 0.74
SMOQ99835 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SMOQ99835 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.66■□□□□ 0.74
SMOQ99835 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMOQ99835 AC034236.2-201ENST00000606662 1610 ntBASIC19.66■□□□□ 0.74
SMOQ99835 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SMOQ99835 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMOQ99835 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMOQ99835 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMOQ99835 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SMOQ99835 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.66■□□□□ 0.74
SMOQ99835 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMOQ99835 SPDYE15P-201ENST00000424157 909 ntBASIC19.66■□□□□ 0.74
SMOQ99835 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.66■□□□□ 0.74
SMOQ99835 AC092647.4-201ENST00000457211 535 ntBASIC19.66■□□□□ 0.74
SMOQ99835 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SMOQ99835 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.66■□□□□ 0.74
SMOQ99835 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.66■□□□□ 0.74
SMOQ99835 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.66■□□□□ 0.74
SMOQ99835 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.66■□□□□ 0.74
SMOQ99835 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SMOQ99835 MYC-208ENST00000641036 567 ntBASIC19.66■□□□□ 0.74
SMOQ99835 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMOQ99835 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMOQ99835 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.66■□□□□ 0.74
SMOQ99835 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMOQ99835 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMOQ99835 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.66■□□□□ 0.74
SMOQ99835 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMOQ99835 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.66■□□□□ 0.74
SMOQ99835 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMOQ99835 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMOQ99835 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.66■□□□□ 0.74
SMOQ99835 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.65■□□□□ 0.74
SMOQ99835 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.65■□□□□ 0.74
SMOQ99835 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.65■□□□□ 0.74
SMOQ99835 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.65■□□□□ 0.74
SMOQ99835 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SMOQ99835 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SMOQ99835 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.65■□□□□ 0.74
SMOQ99835 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.65■□□□□ 0.74
SMOQ99835 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.65■□□□□ 0.74
SMOQ99835 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.65■□□□□ 0.74
SMOQ99835 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.65■□□□□ 0.74
SMOQ99835 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.65■□□□□ 0.74
SMOQ99835 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.65■□□□□ 0.74
SMOQ99835 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.65■□□□□ 0.74
SMOQ99835 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SMOQ99835 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SMOQ99835 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.65■□□□□ 0.74
SMOQ99835 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
SMOQ99835 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMOQ99835 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMOQ99835 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
SMOQ99835 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMOQ99835 ARMC10P1-201ENST00000313754 855 ntBASIC19.64■□□□□ 0.73
SMOQ99835 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMOQ99835 STARP1-201ENST00000397973 869 ntBASIC19.64■□□□□ 0.73
SMOQ99835 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.64■□□□□ 0.73
SMOQ99835 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMOQ99835 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.64■□□□□ 0.73
SMOQ99835 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.64■□□□□ 0.73
SMOQ99835 LINC01238-205ENST00000567549 1107 ntBASIC19.64■□□□□ 0.73
SMOQ99835 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMOQ99835 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.64■□□□□ 0.73
SMOQ99835 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMOQ99835 KRT8P7-201ENST00000533003 1432 ntBASIC19.64■□□□□ 0.73
SMOQ99835 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMOQ99835 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMOQ99835 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms