Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC24.95■■□□□ 1.59
ABCA3Q99758 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
ABCA3Q99758 AL355385.1-201ENST00000606123 409 ntBASIC24.95■■□□□ 1.59
ABCA3Q99758 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
ABCA3Q99758 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ABCA3Q99758 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ABCA3Q99758 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ABCA3Q99758 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ABCA3Q99758 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ABCA3Q99758 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
ABCA3Q99758 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ABCA3Q99758 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.95■■□□□ 1.58
ABCA3Q99758 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ABCA3Q99758 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
ABCA3Q99758 GZMM-202ENST00000592501 941 ntTSL 3 BASIC24.95■■□□□ 1.58
ABCA3Q99758 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC24.95■■□□□ 1.58
ABCA3Q99758 AL691403.2-201ENST00000618460 490 ntBASIC24.95■■□□□ 1.58
ABCA3Q99758 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC24.95■■□□□ 1.58
ABCA3Q99758 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC24.94■■□□□ 1.58
ABCA3Q99758 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
ABCA3Q99758 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
ABCA3Q99758 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ABCA3Q99758 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ABCA3Q99758 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ABCA3Q99758 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ABCA3Q99758 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ABCA3Q99758 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ABCA3Q99758 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
ABCA3Q99758 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ABCA3Q99758 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC24.94■■□□□ 1.58
ABCA3Q99758 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
ABCA3Q99758 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.94■■□□□ 1.58
ABCA3Q99758 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC24.94■■□□□ 1.58
ABCA3Q99758 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ABCA3Q99758 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ABCA3Q99758 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ABCA3Q99758 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC24.94■■□□□ 1.58
ABCA3Q99758 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ABCA3Q99758 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ABCA3Q99758 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC24.93■■□□□ 1.58
ABCA3Q99758 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC24.93■■□□□ 1.58
ABCA3Q99758 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
ABCA3Q99758 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
ABCA3Q99758 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
ABCA3Q99758 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ABCA3Q99758 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC24.93■■□□□ 1.58
ABCA3Q99758 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
ABCA3Q99758 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
ABCA3Q99758 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
ABCA3Q99758 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
ABCA3Q99758 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ABCA3Q99758 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ABCA3Q99758 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
ABCA3Q99758 HIST2H3DP1-201ENST00000401004 416 ntBASIC24.92■■□□□ 1.58
ABCA3Q99758 RBM17P3-201ENST00000417687 1192 ntBASIC24.92■■□□□ 1.58
ABCA3Q99758 MED15P5-201ENST00000423150 992 ntBASIC24.92■■□□□ 1.58
ABCA3Q99758 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC24.92■■□□□ 1.58
ABCA3Q99758 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC24.92■■□□□ 1.58
ABCA3Q99758 AC011840.4-201ENST00000578471 627 ntBASIC24.92■■□□□ 1.58
ABCA3Q99758 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ABCA3Q99758 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
ABCA3Q99758 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ABCA3Q99758 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ABCA3Q99758 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ABCA3Q99758 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ABCA3Q99758 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ABCA3Q99758 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ABCA3Q99758 GGCT-205ENST00000409436 954 ntTSL 3 BASIC24.92■■□□□ 1.58
ABCA3Q99758 POM121L3P-201ENST00000419331 1163 ntBASIC24.92■■□□□ 1.58
ABCA3Q99758 GPX1P2-201ENST00000429271 606 ntBASIC24.92■■□□□ 1.58
ABCA3Q99758 URGCP-206ENST00000446958 365 ntTSL 2 BASIC24.92■■□□□ 1.58
ABCA3Q99758 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC24.92■■□□□ 1.58
ABCA3Q99758 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC24.92■■□□□ 1.58
ABCA3Q99758 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC24.92■■□□□ 1.58
ABCA3Q99758 AL139424.1-201ENST00000607572 797 ntBASIC24.92■■□□□ 1.58
ABCA3Q99758 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
ABCA3Q99758 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
ABCA3Q99758 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC24.91■■□□□ 1.58
ABCA3Q99758 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC24.91■■□□□ 1.58
ABCA3Q99758 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC24.91■■□□□ 1.58
ABCA3Q99758 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
ABCA3Q99758 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
ABCA3Q99758 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC24.91■■□□□ 1.58
ABCA3Q99758 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC24.91■■□□□ 1.58
ABCA3Q99758 AC093909.1-201ENST00000504731 1122 ntBASIC24.91■■□□□ 1.58
ABCA3Q99758 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC24.91■■□□□ 1.58
ABCA3Q99758 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC24.91■■□□□ 1.58
ABCA3Q99758 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC24.91■■□□□ 1.58
ABCA3Q99758 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC24.91■■□□□ 1.58
ABCA3Q99758 FAM215A-202ENST00000632077 792 ntBASIC24.91■■□□□ 1.58
ABCA3Q99758 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.91■■□□□ 1.58
ABCA3Q99758 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.91■■□□□ 1.58
ABCA3Q99758 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
ABCA3Q99758 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ABCA3Q99758 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
ABCA3Q99758 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
ABCA3Q99758 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ABCA3Q99758 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.9■■□□□ 1.58
ABCA3Q99758 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ABCA3Q99758 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms