Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.49■□□□□ 0.07
S1PR3Q99500 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
S1PR3Q99500 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
S1PR3Q99500 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.49■□□□□ 0.07
S1PR3Q99500 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.49■□□□□ 0.07
S1PR3Q99500 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.49■□□□□ 0.07
S1PR3Q99500 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.49■□□□□ 0.07
S1PR3Q99500 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.49■□□□□ 0.07
S1PR3Q99500 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.49■□□□□ 0.07
S1PR3Q99500 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.49■□□□□ 0.07
S1PR3Q99500 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 AL512353.2-201ENST00000448759 1962 ntBASIC15.49■□□□□ 0.07
S1PR3Q99500 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
S1PR3Q99500 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
S1PR3Q99500 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
S1PR3Q99500 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
S1PR3Q99500 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
S1PR3Q99500 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
S1PR3Q99500 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
S1PR3Q99500 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
S1PR3Q99500 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.48■□□□□ 0.07
S1PR3Q99500 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
S1PR3Q99500 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.48■□□□□ 0.07
S1PR3Q99500 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.48■□□□□ 0.07
S1PR3Q99500 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.48■□□□□ 0.07
S1PR3Q99500 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 Z85996.1-201ENST00000494644 937 ntBASIC15.48■□□□□ 0.07
S1PR3Q99500 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
S1PR3Q99500 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.48■□□□□ 0.07
S1PR3Q99500 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.48■□□□□ 0.07
S1PR3Q99500 AC083906.6-201ENST00000641366 219 ntBASIC15.48■□□□□ 0.07
S1PR3Q99500 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.48■□□□□ 0.07
S1PR3Q99500 KRT16P1-201ENST00000399124 1418 ntBASIC15.48■□□□□ 0.07
S1PR3Q99500 AL135905.2-201ENST00000584934 1404 ntBASIC15.48■□□□□ 0.07
S1PR3Q99500 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
S1PR3Q99500 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.48■□□□□ 0.07
S1PR3Q99500 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.48■□□□□ 0.07
S1PR3Q99500 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
S1PR3Q99500 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.47■□□□□ 0.07
S1PR3Q99500 WIZP1-201ENST00000531444 2299 ntBASIC15.47■□□□□ 0.07
S1PR3Q99500 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.47■□□□□ 0.07
S1PR3Q99500 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.47■□□□□ 0.07
S1PR3Q99500 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
S1PR3Q99500 NEFHP1-201ENST00000412845 2629 ntBASIC15.47■□□□□ 0.07
S1PR3Q99500 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
S1PR3Q99500 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 PRSS44-201ENST00000515154 1146 ntBASIC15.47■□□□□ 0.07
S1PR3Q99500 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
S1PR3Q99500 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.47■□□□□ 0.07
S1PR3Q99500 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.47■□□□□ 0.07
S1PR3Q99500 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.47■□□□□ 0.07
S1PR3Q99500 AL031985.4-201ENST00000642138 673 ntBASIC15.47■□□□□ 0.07
S1PR3Q99500 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
S1PR3Q99500 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms