Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.67■□□□□ 0.42
NR1H4Q96RI1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 AC142381.2-201ENST00000566120 298 ntBASIC17.67■□□□□ 0.42
NR1H4Q96RI1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H4Q96RI1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 MST1L-201ENST00000442552 2185 ntBASIC17.66■□□□□ 0.42
NR1H4Q96RI1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 SUDS3P1-201ENST00000505831 966 ntBASIC17.66■□□□□ 0.42
NR1H4Q96RI1 AC012414.1-201ENST00000556676 535 ntBASIC17.66■□□□□ 0.42
NR1H4Q96RI1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 AL139246.5-201ENST00000606645 996 ntBASIC17.66■□□□□ 0.42
NR1H4Q96RI1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NR1H4Q96RI1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 AL121761.2-201ENST00000598007 1648 ntBASIC17.65■□□□□ 0.42
NR1H4Q96RI1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.65■□□□□ 0.42
NR1H4Q96RI1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 MIR6084-201ENST00000622012 110 ntBASIC17.65■□□□□ 0.42
NR1H4Q96RI1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
NR1H4Q96RI1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.64■□□□□ 0.42
NR1H4Q96RI1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.64■□□□□ 0.42
NR1H4Q96RI1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NR1H4Q96RI1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NR1H4Q96RI1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NR1H4Q96RI1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NR1H4Q96RI1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms