Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 CRYGFP-201ENST00000418459 633 ntBASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 TSPY7P-201ENST00000431358 1114 ntBASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.5■□□□□ 0.39
MS4A4EQ96PG1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 UNC93B2-201ENST00000285383 730 ntBASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 MYC-208ENST00000641036 567 ntBASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MS4A4EQ96PG1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 AL109659.2-201ENST00000606809 1674 ntBASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 AC020763.4-201ENST00000623414 4170 ntBASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 RBM17P1-201ENST00000453646 1190 ntBASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MS4A4EQ96PG1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 AC005082.1-201ENST00000413042 2259 ntBASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MS4A4EQ96PG1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms