Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.01■□□□□ 0.79
CASD1Q96PB1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CASD1Q96PB1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.01■□□□□ 0.79
CASD1Q96PB1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20■□□□□ 0.79
CASD1Q96PB1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CASD1Q96PB1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CASD1Q96PB1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CASD1Q96PB1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
CASD1Q96PB1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CASD1Q96PB1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CASD1Q96PB1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CASD1Q96PB1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CASD1Q96PB1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CASD1Q96PB1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20■□□□□ 0.79
CASD1Q96PB1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20■□□□□ 0.79
CASD1Q96PB1 AC012615.1-201ENST00000565797 1299 ntBASIC20■□□□□ 0.79
CASD1Q96PB1 AC090616.6-201ENST00000582640 721 ntBASIC20■□□□□ 0.79
CASD1Q96PB1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20■□□□□ 0.79
CASD1Q96PB1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20■□□□□ 0.79
CASD1Q96PB1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20■□□□□ 0.79
CASD1Q96PB1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20■□□□□ 0.79
CASD1Q96PB1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20■□□□□ 0.79
CASD1Q96PB1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CASD1Q96PB1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20■□□□□ 0.79
CASD1Q96PB1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20■□□□□ 0.79
CASD1Q96PB1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20■□□□□ 0.79
CASD1Q96PB1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CASD1Q96PB1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20■□□□□ 0.79
CASD1Q96PB1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.99■□□□□ 0.79
CASD1Q96PB1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.99■□□□□ 0.79
CASD1Q96PB1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.99■□□□□ 0.79
CASD1Q96PB1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.99■□□□□ 0.79
CASD1Q96PB1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.99■□□□□ 0.79
CASD1Q96PB1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CASD1Q96PB1 EMBP1-201ENST00000458200 901 ntBASIC19.99■□□□□ 0.79
CASD1Q96PB1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.99■□□□□ 0.79
CASD1Q96PB1 FOSL1P1-201ENST00000511041 816 ntBASIC19.99■□□□□ 0.79
CASD1Q96PB1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.99■□□□□ 0.79
CASD1Q96PB1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.99■□□□□ 0.79
CASD1Q96PB1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.99■□□□□ 0.79
CASD1Q96PB1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CASD1Q96PB1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.99■□□□□ 0.79
CASD1Q96PB1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CASD1Q96PB1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CASD1Q96PB1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASD1Q96PB1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASD1Q96PB1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASD1Q96PB1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CASD1Q96PB1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASD1Q96PB1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CASD1Q96PB1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.98■□□□□ 0.79
CASD1Q96PB1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CASD1Q96PB1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CASD1Q96PB1 GPR32P1-201ENST00000601788 811 ntBASIC19.98■□□□□ 0.79
CASD1Q96PB1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.98■□□□□ 0.79
CASD1Q96PB1 IGHV3-41-201ENST00000613121 348 ntBASIC19.98■□□□□ 0.79
CASD1Q96PB1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.98■□□□□ 0.79
CASD1Q96PB1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CASD1Q96PB1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CASD1Q96PB1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.98■□□□□ 0.79
CASD1Q96PB1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CASD1Q96PB1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CASD1Q96PB1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASD1Q96PB1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CASD1Q96PB1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASD1Q96PB1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASD1Q96PB1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CASD1Q96PB1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.97■□□□□ 0.79
CASD1Q96PB1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CASD1Q96PB1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASD1Q96PB1 IGHGP-201ENST00000390555 1178 ntBASIC19.97■□□□□ 0.79
CASD1Q96PB1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.97■□□□□ 0.79
CASD1Q96PB1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.97■□□□□ 0.79
CASD1Q96PB1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CASD1Q96PB1 AC091304.2-201ENST00000564639 760 ntBASIC19.97■□□□□ 0.79
CASD1Q96PB1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.97■□□□□ 0.79
CASD1Q96PB1 AL121772.3-201ENST00000610840 674 ntBASIC19.97■□□□□ 0.79
CASD1Q96PB1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.97■□□□□ 0.79
CASD1Q96PB1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASD1Q96PB1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.97■□□□□ 0.79
CASD1Q96PB1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASD1Q96PB1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASD1Q96PB1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASD1Q96PB1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASD1Q96PB1 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms