Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF558Q96NG5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 KRT18P31-201ENST00000506277 1292 ntBASIC19.89■□□□□ 0.77
ZNF558Q96NG5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.89■□□□□ 0.77
ZNF558Q96NG5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 AC074051.2-201ENST00000565115 352 ntBASIC19.88■□□□□ 0.77
ZNF558Q96NG5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 AL031008.1-201ENST00000619963 541 ntBASIC19.88■□□□□ 0.77
ZNF558Q96NG5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF558Q96NG5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.87■□□□□ 0.77
ZNF558Q96NG5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 FP475955.4-201ENST00000623131 1990 ntBASIC19.87■□□□□ 0.77
ZNF558Q96NG5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 AC138894.3-201ENST00000603787 634 ntBASIC19.87■□□□□ 0.77
ZNF558Q96NG5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ZNF558Q96NG5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 AC233702.3-201ENST00000578656 1387 ntBASIC19.86■□□□□ 0.77
ZNF558Q96NG5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms