Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.33■□□□□ 0.53
PDLIM5Q96HC4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PDLIM5Q96HC4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM5Q96HC4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.33■□□□□ 0.53
PDLIM5Q96HC4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM5Q96HC4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM5Q96HC4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PDLIM5Q96HC4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM5Q96HC4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 MIR4785-201ENST00000585005 73 ntBASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM5Q96HC4 LETM1P2-201ENST00000597330 2178 ntBASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 AC026471.1-201ENST00000564629 3026 ntBASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 GPAT2P1-201ENST00000444924 1672 ntBASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 UNC93B2-201ENST00000285383 730 ntBASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 RBM17P1-201ENST00000453646 1190 ntBASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 AL023803.3-201ENST00000615559 522 ntBASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PDLIM5Q96HC4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 SLC25A1P2-201ENST00000430693 912 ntBASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 MCCD1P1-208ENST00000445732 328 ntBASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDLIM5Q96HC4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 AL162741.1-201ENST00000565563 1558 ntBASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDLIM5Q96HC4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms