Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.85■□□□□ 0.45
LRRC58Q96CX6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 AC068587.9-201ENST00000641814 219 ntBASIC17.85■□□□□ 0.45
LRRC58Q96CX6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC58Q96CX6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.84■□□□□ 0.45
LRRC58Q96CX6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 SOX15-203ENST00000570788 1093 ntBASIC17.84■□□□□ 0.45
LRRC58Q96CX6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 MIR4758-201ENST00000577688 71 ntBASIC17.84■□□□□ 0.45
LRRC58Q96CX6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC58Q96CX6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC58Q96CX6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC58Q96CX6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.83■□□□□ 0.45
LRRC58Q96CX6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC58Q96CX6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC58Q96CX6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.83■□□□□ 0.45
LRRC58Q96CX6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC58Q96CX6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC58Q96CX6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
LRRC58Q96CX6 KRT8P41-201ENST00000533985 1514 ntBASIC17.83■□□□□ 0.45
LRRC58Q96CX6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC58Q96CX6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC58Q96CX6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC58Q96CX6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
LRRC58Q96CX6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC58Q96CX6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms