Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.62■□□□□ 0.73
USP13Q92995 VENTXP5-201ENST00000523979 775 ntBASIC19.62■□□□□ 0.73
USP13Q92995 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.62■□□□□ 0.73
USP13Q92995 ZNF444P1-201ENST00000559497 298 ntBASIC19.62■□□□□ 0.73
USP13Q92995 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.62■□□□□ 0.73
USP13Q92995 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.62■□□□□ 0.73
USP13Q92995 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
USP13Q92995 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.62■□□□□ 0.73
USP13Q92995 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
USP13Q92995 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP13Q92995 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP13Q92995 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP13Q92995 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
USP13Q92995 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.61■□□□□ 0.73
USP13Q92995 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.61■□□□□ 0.73
USP13Q92995 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.61■□□□□ 0.73
USP13Q92995 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
USP13Q92995 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.61■□□□□ 0.73
USP13Q92995 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
USP13Q92995 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP13Q92995 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.6■□□□□ 0.73
USP13Q92995 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP13Q92995 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP13Q92995 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP13Q92995 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP13Q92995 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
USP13Q92995 LINC01311-201ENST00000565162 1445 ntBASIC19.6■□□□□ 0.73
USP13Q92995 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP13Q92995 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP13Q92995 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.6■□□□□ 0.73
USP13Q92995 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
USP13Q92995 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
USP13Q92995 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.6■□□□□ 0.73
USP13Q92995 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP13Q92995 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.6■□□□□ 0.73
USP13Q92995 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.6■□□□□ 0.73
USP13Q92995 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP13Q92995 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.6■□□□□ 0.73
USP13Q92995 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.6■□□□□ 0.73
USP13Q92995 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.6■□□□□ 0.73
USP13Q92995 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.6■□□□□ 0.73
USP13Q92995 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
USP13Q92995 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP13Q92995 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP13Q92995 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP13Q92995 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP13Q92995 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
USP13Q92995 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
USP13Q92995 AC125437.2-201ENST00000625180 2167 ntBASIC19.6■□□□□ 0.73
USP13Q92995 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP13Q92995 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP13Q92995 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP13Q92995 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 AC036111.1-201ENST00000533973 1582 ntBASIC19.59■□□□□ 0.73
USP13Q92995 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
USP13Q92995 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.59■□□□□ 0.73
USP13Q92995 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.59■□□□□ 0.73
USP13Q92995 KRT18P56-201ENST00000507275 550 ntBASIC19.59■□□□□ 0.73
USP13Q92995 AC093458.2-201ENST00000623150 629 ntBASIC19.59■□□□□ 0.73
USP13Q92995 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
USP13Q92995 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.59■□□□□ 0.73
USP13Q92995 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
USP13Q92995 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
USP13Q92995 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.59■□□□□ 0.73
USP13Q92995 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP13Q92995 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.59■□□□□ 0.73
USP13Q92995 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
USP13Q92995 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.58■□□□□ 0.73
USP13Q92995 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.58■□□□□ 0.73
USP13Q92995 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
USP13Q92995 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
USP13Q92995 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms