Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 AL160237.2-201ENST00000556165 472 ntBASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 AC074051.2-201ENST00000565115 352 ntBASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 TK1-205ENST00000590862 642 ntTSL 3 BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 LINC01521-201ENST00000504184 1943 ntBASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPGEF4Q8WZA2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 AC079781.3-201ENST00000449110 356 ntBASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 AC138894.3-201ENST00000603787 634 ntBASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
RAPGEF4Q8WZA2 AC233702.3-201ENST00000578656 1387 ntBASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 LINC00167-201ENST00000530583 1419 ntBASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC24.54■■□□□ 1.52
RAPGEF4Q8WZA2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 CYP51A1P1-201ENST00000492267 1507 ntBASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 IGHGP-201ENST00000390555 1178 ntBASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC24.53■■□□□ 1.52
RAPGEF4Q8WZA2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 Z69720.1-201ENST00000601483 472 ntBASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms