Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF139Q8WU17 GPAT2P1-201ENST00000444924 1672 ntBASIC19.68■□□□□ 0.74
RNF139Q8WU17 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF139Q8WU17 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RNF139Q8WU17 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF139Q8WU17 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
RNF139Q8WU17 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF139Q8WU17 KRT8P45-201ENST00000414328 1447 ntBASIC19.68■□□□□ 0.74
RNF139Q8WU17 AC073508.3-201ENST00000619697 1419 ntBASIC19.68■□□□□ 0.74
RNF139Q8WU17 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF139Q8WU17 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF139Q8WU17 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
RNF139Q8WU17 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 AL512353.2-201ENST00000448759 1962 ntBASIC19.67■□□□□ 0.74
RNF139Q8WU17 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 AL023284.2-201ENST00000405850 579 ntBASIC19.67■□□□□ 0.74
RNF139Q8WU17 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 MCCD1P1-208ENST00000445732 328 ntBASIC19.67■□□□□ 0.74
RNF139Q8WU17 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF139Q8WU17 MIR4674-201ENST00000582457 87 ntBASIC19.67■□□□□ 0.74
RNF139Q8WU17 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RNF139Q8WU17 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
RNF139Q8WU17 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF139Q8WU17 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF139Q8WU17 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF139Q8WU17 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF139Q8WU17 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF139Q8WU17 AC006333.2-201ENST00000607957 2099 ntBASIC19.66■□□□□ 0.74
RNF139Q8WU17 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF139Q8WU17 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF139Q8WU17 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF139Q8WU17 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF139Q8WU17 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF139Q8WU17 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.66■□□□□ 0.74
RNF139Q8WU17 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF139Q8WU17 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF139Q8WU17 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF139Q8WU17 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF139Q8WU17 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF139Q8WU17 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RNF139Q8WU17 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF139Q8WU17 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF139Q8WU17 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RNF139Q8WU17 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF139Q8WU17 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF139Q8WU17 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF139Q8WU17 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF139Q8WU17 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF139Q8WU17 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF139Q8WU17 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
RNF139Q8WU17 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF139Q8WU17 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
RNF139Q8WU17 BX664615.1-201ENST00000443558 458 ntBASIC19.65■□□□□ 0.74
RNF139Q8WU17 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RNF139Q8WU17 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.65■□□□□ 0.74
RNF139Q8WU17 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
RNF139Q8WU17 AC141257.4-201ENST00000634557 245 ntBASIC19.65■□□□□ 0.74
RNF139Q8WU17 AC136944.6-201ENST00000634818 245 ntBASIC19.65■□□□□ 0.74
RNF139Q8WU17 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RNF139Q8WU17 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF139Q8WU17 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF139Q8WU17 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
RNF139Q8WU17 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF139Q8WU17 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF139Q8WU17 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.64■□□□□ 0.74
RNF139Q8WU17 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
RNF139Q8WU17 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF139Q8WU17 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF139Q8WU17 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms