Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 WIZP1-201ENST00000531444 2299 ntBASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 ANO7L1-203ENST00000602586 1720 ntBASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 MIR6786-201ENST00000616843 113 ntBASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF3IP1Q8TDR0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 UBE2SP1-201ENST00000450587 669 ntBASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 AC098590.1-201ENST00000468126 897 ntBASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 CD177P1-201ENST00000606252 935 ntBASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 FSCN1P1-201ENST00000568912 1481 ntBASIC19.54■□□□□ 0.72
TRAF3IP1Q8TDR0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 B3GAT3P1-201ENST00000471720 806 ntBASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 AC130371.2-201ENST00000619443 611 ntBASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRAF3IP1Q8TDR0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 HEIH-201ENST00000623091 1652 ntBASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms