Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 KRT8P3-201ENST00000519669 1449 ntBASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 NBPF21P-201ENST00000425093 1451 ntBASIC16.42■□□□□ 0.22
RPS4Y2Q8TD47 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 POM121L13P-201ENST00000422362 380 ntBASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 UNC93B4-201ENST00000505679 747 ntBASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 KRT8P11-201ENST00000409686 1436 ntBASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RPS4Y2Q8TD47 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 AC020763.4-201ENST00000623414 4170 ntBASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 AC008556.1-201ENST00000610908 2040 ntBASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4Y2Q8TD47 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms