Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCHCR1Q8TD31 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 AL354751.1-201ENST00000412768 1863 ntBASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCHCR1Q8TD31 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 AL135905.2-201ENST00000584934 1404 ntBASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 AL353807.1-201ENST00000427475 662 ntBASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 RARRES2P10-201ENST00000564312 460 ntBASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 AL160286.2-201ENST00000567150 934 ntBASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.53■□□□□ 0.72
CCHCR1Q8TD31 HTR7P1-201ENST00000538670 1336 ntBASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCHCR1Q8TD31 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCHCR1Q8TD31 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCHCR1Q8TD31 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CCHCR1Q8TD31 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.52■□□□□ 0.71
CCHCR1Q8TD31 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCHCR1Q8TD31 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCHCR1Q8TD31 AC073592.3-201ENST00000625118 1834 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms