Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLL1Q8TB92 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLL1Q8TB92 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLL1Q8TB92 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLL1Q8TB92 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCLL1Q8TB92 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 MMP23A-201ENST00000234610 1017 ntBASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 MIR1238-201ENST00000408483 83 ntBASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 NOC2LP2-201ENST00000407594 1944 ntBASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCLL1Q8TB92 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 ANO7L1-203ENST00000602586 1720 ntBASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGCLL1Q8TB92 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HMGCLL1Q8TB92 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.54
HMGCLL1Q8TB92 AC068880.1-201ENST00000507289 2297 ntBASIC18.39■□□□□ 0.54
HMGCLL1Q8TB92 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HMGCLL1Q8TB92 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HMGCLL1Q8TB92 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 AL390955.1-201ENST00000428694 934 ntBASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCLL1Q8TB92 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms