Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 MMP23A-201ENST00000234610 1017 ntBASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 AL109659.2-201ENST00000606809 1674 ntBASIC17.9■□□□□ 0.46
SRFBP1Q8NEF9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SRFBP1Q8NEF9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SRFBP1Q8NEF9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SRFBP1Q8NEF9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.89■□□□□ 0.46
SRFBP1Q8NEF9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
SRFBP1Q8NEF9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 AC128688.1-201ENST00000487626 519 ntBASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 AL353719.1-201ENST00000566847 864 ntBASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 CROCCP3-202ENST00000420820 1947 ntBASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRFBP1Q8NEF9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 RCC2P3-201ENST00000418112 1537 ntBASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 EGLN1P1-201ENST00000531623 762 ntBASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 NAPSB-206ENST00000562112 1266 ntBASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 AL023803.3-201ENST00000615559 522 ntBASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 AC026471.1-201ENST00000564629 3026 ntBASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SRFBP1Q8NEF9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 AL031598.1-201ENST00000561511 1773 ntBASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 AC020763.4-201ENST00000623414 4170 ntBASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 TSPY14P-201ENST00000303979 915 ntBASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 AL390955.1-201ENST00000428694 934 ntBASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 MCCD1P1-208ENST00000445732 328 ntBASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 BX088651.1-201ENST00000540551 451 ntBASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 AC010653.2-201ENST00000623505 997 ntBASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRFBP1Q8NEF9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms