Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.68■□□□□ 0.42
SLC38A9Q8NBW4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A9Q8NBW4 AC069148.1-201ENST00000608741 768 ntBASIC17.68■□□□□ 0.42
SLC38A9Q8NBW4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A9Q8NBW4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A9Q8NBW4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC38A9Q8NBW4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 MIR564-202ENST00000385049 94 ntBASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 AL645929.1-201ENST00000420084 975 ntBASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 MIR3917-201ENST00000580971 93 ntBASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A9Q8NBW4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 KRT18P23-201ENST00000435622 1283 ntBASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC38A9Q8NBW4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC38A9Q8NBW4 HOXB1-202ENST00000577092 1414 ntBASIC17.64■□□□□ 0.42
SLC38A9Q8NBW4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
SLC38A9Q8NBW4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC38A9Q8NBW4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC38A9Q8NBW4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLC38A9Q8NBW4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC38A9Q8NBW4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
SLC38A9Q8NBW4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC38A9Q8NBW4 HLA-F-220ENST00000434407 884 ntBASIC17.64■□□□□ 0.41
SLC38A9Q8NBW4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.64■□□□□ 0.41
SLC38A9Q8NBW4 HCG4P8-203ENST00000443049 980 ntBASIC17.64■□□□□ 0.41
SLC38A9Q8NBW4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.64■□□□□ 0.41
SLC38A9Q8NBW4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.64■□□□□ 0.41
SLC38A9Q8NBW4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC38A9Q8NBW4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.64■□□□□ 0.41
SLC38A9Q8NBW4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms