Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 AC087499.1-201ENST00000418141 1075 ntBASIC19.26■□□□□ 0.67
PAF1Q8N7H5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 FITM1-202ENST00000559294 800 ntBASIC19.26■□□□□ 0.67
PAF1Q8N7H5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.26■□□□□ 0.67
PAF1Q8N7H5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PAF1Q8N7H5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 TSPY23P-201ENST00000440136 739 ntBASIC19.24■□□□□ 0.67
PAF1Q8N7H5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 AP005242.2-201ENST00000580065 1175 ntBASIC19.24■□□□□ 0.67
PAF1Q8N7H5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.24■□□□□ 0.67
PAF1Q8N7H5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 LINC01568-207ENST00000641790 1380 ntBASIC19.23■□□□□ 0.67
PAF1Q8N7H5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 CKBP1-201ENST00000565489 1086 ntBASIC19.23■□□□□ 0.67
PAF1Q8N7H5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms