Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 HMGA1P5-201ENST00000412453 271 ntBASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 SLC25A3P1-201ENST00000443844 931 ntBASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SCUBE3Q8IX30 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 AC005363.2-201ENST00000618631 242 ntBASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 CR769767.2-201ENST00000622735 460 ntBASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 AL031598.1-201ENST00000561511 1773 ntBASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.69■□□□□ 0.74
SCUBE3Q8IX30 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 AC010203.1-204ENST00000548782 407 ntBASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 AC036111.1-201ENST00000533973 1582 ntBASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SCUBE3Q8IX30 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 AC093525.10-201ENST00000625130 1569 ntBASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 KRT18P35-201ENST00000510488 1269 ntBASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 MIR3180-5-201ENST00000583743 153 ntBASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.67■□□□□ 0.74
SCUBE3Q8IX30 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms