Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 FITM1-202ENST00000559294 800 ntBASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMP1BQ7LBR1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 AP000692.2-201ENST00000608391 879 ntBASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHMP1BQ7LBR1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 LINC01465-201ENST00000408887 1940 ntBASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 AC007613.1-201ENST00000572811 2597 ntBASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 AL390955.1-201ENST00000428694 934 ntBASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.27■□□□□ 0.36
CHMP1BQ7LBR1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms