Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 SDHAP1-207ENST00000440850 2000 ntBASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00173Q6ZV60 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 AC096631.2-201ENST00000436136 790 ntBASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 SLC7A5P1-201ENST00000568957 537 ntBASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 AL596257.1-201ENST00000641463 2694 ntBASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00173Q6ZV60 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00173Q6ZV60 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00173Q6ZV60 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.58□□□□□ -0.23
LINC00173Q6ZV60 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00173Q6ZV60 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 AC019069.1-201ENST00000610008 1333 ntBASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00173Q6ZV60 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms