Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC133681.1-201ENST00000465482 601 ntBASIC19.14■□□□□ 0.65
CASC4Q6P4E1 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 AC131212.4-201ENST00000623606 975 ntBASIC19.14■□□□□ 0.65
CASC4Q6P4E1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 AP002982.1-201ENST00000492365 877 ntBASIC19.13■□□□□ 0.65
CASC4Q6P4E1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 AL445675.2-201ENST00000620291 557 ntBASIC19.13■□□□□ 0.65
CASC4Q6P4E1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.13■□□□□ 0.65
CASC4Q6P4E1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 CD99P1-205ENST00000527459 561 ntBASIC19.12■□□□□ 0.65
CASC4Q6P4E1 C1QBPP2-201ENST00000528754 825 ntBASIC19.12■□□□□ 0.65
CASC4Q6P4E1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CASC4Q6P4E1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.11■□□□□ 0.65
CASC4Q6P4E1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 HTR7P1-201ENST00000538670 1336 ntBASIC19.11■□□□□ 0.65
CASC4Q6P4E1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.11■□□□□ 0.65
CASC4Q6P4E1 NIFKP9-201ENST00000419265 221 ntBASIC19.11■□□□□ 0.65
CASC4Q6P4E1 AC128676.1-201ENST00000454392 318 ntBASIC19.11■□□□□ 0.65
CASC4Q6P4E1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms