Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT4Q643R3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT4Q643R3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 AC093677.2-201ENST00000600169 1863 ntBASIC17.67■□□□□ 0.42
LPCAT4Q643R3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 TERF1P2-201ENST00000583350 1212 ntBASIC17.67■□□□□ 0.42
LPCAT4Q643R3 UBE2DNL-204ENST00000602536 740 ntBASIC17.67■□□□□ 0.42
LPCAT4Q643R3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.67■□□□□ 0.42
LPCAT4Q643R3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT4Q643R3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 KRT18P68-201ENST00000392293 1000 ntBASIC17.66■□□□□ 0.42
LPCAT4Q643R3 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.66■□□□□ 0.42
LPCAT4Q643R3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.66■□□□□ 0.42
LPCAT4Q643R3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms