Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 BX276092.2-201ENST00000417668 665 ntBASIC14.88□□□□□ -0.03
FAM78BQ5VT40 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 AC092666.2-201ENST00000613287 246 ntBASIC14.88□□□□□ -0.03
FAM78BQ5VT40 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 CROCCP1-201ENST00000426910 5675 ntBASIC14.88□□□□□ -0.03
FAM78BQ5VT40 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 ABALON-201ENST00000629058 1903 ntBASIC14.88□□□□□ -0.03
FAM78BQ5VT40 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.88□□□□□ -0.03
FAM78BQ5VT40 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.87□□□□□ -0.03
FAM78BQ5VT40 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FAM78BQ5VT40 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 KRT8P8-201ENST00000434750 1448 ntBASIC14.86□□□□□ -0.03
FAM78BQ5VT40 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 AC083906.2-201ENST00000511578 360 ntBASIC14.86□□□□□ -0.03
FAM78BQ5VT40 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 AL121832.2-201ENST00000610979 668 ntBASIC14.86□□□□□ -0.03
FAM78BQ5VT40 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FAM78BQ5VT40 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms