Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SGO1Q5FBB7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
SGO1Q5FBB7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SGO1Q5FBB7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SGO1Q5FBB7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.25■□□□□ 0.51
SGO1Q5FBB7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SGO1Q5FBB7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGO1Q5FBB7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 KRT18P29-201ENST00000397031 1267 ntBASIC18.23■□□□□ 0.51
SGO1Q5FBB7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 KSR1P1-201ENST00000446298 240 ntBASIC18.23■□□□□ 0.51
SGO1Q5FBB7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.23■□□□□ 0.51
SGO1Q5FBB7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGO1Q5FBB7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.22■□□□□ 0.51
SGO1Q5FBB7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 AC091390.4-202ENST00000476426 537 ntBASIC18.22■□□□□ 0.51
SGO1Q5FBB7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 KRT16P1-201ENST00000399124 1418 ntBASIC18.22■□□□□ 0.51
SGO1Q5FBB7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 AC090164.3-201ENST00000610780 2143 ntBASIC18.22■□□□□ 0.51
SGO1Q5FBB7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.22■□□□□ 0.51
SGO1Q5FBB7 RCC2P6-201ENST00000526625 1557 ntBASIC18.21■□□□□ 0.51
SGO1Q5FBB7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SGO1Q5FBB7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGO1Q5FBB7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.21■□□□□ 0.51
SGO1Q5FBB7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGO1Q5FBB7 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.21■□□□□ 0.51
SGO1Q5FBB7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGO1Q5FBB7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGO1Q5FBB7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGO1Q5FBB7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SGO1Q5FBB7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms