Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC178Q5BJE1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 TSPY5P-201ENST00000426936 936 ntBASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 DUX4L26-201ENST00000489078 1255 ntBASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 AL049597.2-201ENST00000565575 961 ntBASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 AC011558.1-201ENST00000623459 338 ntBASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC178Q5BJE1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 HOMER2P1-201ENST00000455653 964 ntBASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC178Q5BJE1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 MTMR9LP-203ENST00000426597 1545 ntBASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 AL023973.1-201ENST00000624619 620 ntBASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 AL590326.2-201ENST00000625139 305 ntBASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.9■■□□□ 1.1
CCDC178Q5BJE1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC178Q5BJE1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC178Q5BJE1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC178Q5BJE1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC178Q5BJE1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 KRT18P23-201ENST00000435622 1283 ntBASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 AC063952.2-201ENST00000498792 1227 ntBASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 KRT18P41-201ENST00000518924 1277 ntBASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 AL357033.4-201ENST00000617703 1807 ntBASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 Z98044.1-201ENST00000632503 1764 ntBASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC178Q5BJE1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC178Q5BJE1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC178Q5BJE1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms