Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SPIN4Q56A73 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.92■□□□□ 0.46
SPIN4Q56A73 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPIN4Q56A73 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.91■□□□□ 0.46
SPIN4Q56A73 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SPIN4Q56A73 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.9■□□□□ 0.46
SPIN4Q56A73 ABHD17AP1-201ENST00000358206 933 ntBASIC17.9■□□□□ 0.46
SPIN4Q56A73 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.9■□□□□ 0.46
SPIN4Q56A73 AC233702.5-201ENST00000584107 538 ntBASIC17.9■□□□□ 0.46
SPIN4Q56A73 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.9■□□□□ 0.46
SPIN4Q56A73 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
SPIN4Q56A73 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.9■□□□□ 0.46
SPIN4Q56A73 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.9■□□□□ 0.46
SPIN4Q56A73 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.9■□□□□ 0.46
SPIN4Q56A73 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SPIN4Q56A73 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.9■□□□□ 0.46
SPIN4Q56A73 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPIN4Q56A73 AC112777.1-201ENST00000540175 1423 ntBASIC17.89■□□□□ 0.46
SPIN4Q56A73 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.89■□□□□ 0.46
SPIN4Q56A73 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SPIN4Q56A73 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.89■□□□□ 0.46
SPIN4Q56A73 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 AL357033.4-201ENST00000617703 1807 ntBASIC17.89■□□□□ 0.45
SPIN4Q56A73 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 AC126763.1-201ENST00000552015 2118 ntBASIC17.89■□□□□ 0.45
SPIN4Q56A73 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPIN4Q56A73 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
SPIN4Q56A73 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SPIN4Q56A73 AC135050.7-201ENST00000624508 2218 ntBASIC17.88■□□□□ 0.45
SPIN4Q56A73 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPIN4Q56A73 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.88■□□□□ 0.45
SPIN4Q56A73 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.88■□□□□ 0.45
SPIN4Q56A73 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.88■□□□□ 0.45
SPIN4Q56A73 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms