Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.52■■□□□ 1.03
USH1GQ495M9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.52■■□□□ 1.03
USH1GQ495M9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
USH1GQ495M9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USH1GQ495M9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
USH1GQ495M9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USH1GQ495M9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USH1GQ495M9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USH1GQ495M9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.51■■□□□ 1.03
USH1GQ495M9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
USH1GQ495M9 KRT18P23-201ENST00000435622 1283 ntBASIC21.51■■□□□ 1.03
USH1GQ495M9 AC092597.1-201ENST00000487352 616 ntBASIC21.51■■□□□ 1.03
USH1GQ495M9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.51■■□□□ 1.03
USH1GQ495M9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.51■■□□□ 1.03
USH1GQ495M9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USH1GQ495M9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
USH1GQ495M9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
USH1GQ495M9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USH1GQ495M9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
USH1GQ495M9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.51■■□□□ 1.03
USH1GQ495M9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USH1GQ495M9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
USH1GQ495M9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.5■■□□□ 1.03
USH1GQ495M9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.5■■□□□ 1.03
USH1GQ495M9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.5■■□□□ 1.03
USH1GQ495M9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 UPK3BP1-201ENST00000428678 509 ntBASIC21.5■■□□□ 1.03
USH1GQ495M9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.5■■□□□ 1.03
USH1GQ495M9 AC034232.1-201ENST00000506026 1064 ntBASIC21.5■■□□□ 1.03
USH1GQ495M9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.5■■□□□ 1.03
USH1GQ495M9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.5■■□□□ 1.03
USH1GQ495M9 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.5■■□□□ 1.03
USH1GQ495M9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.5■■□□□ 1.03
USH1GQ495M9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 AC005332.1-201ENST00000577698 1310 ntBASIC21.5■■□□□ 1.03
USH1GQ495M9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.5■■□□□ 1.03
USH1GQ495M9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USH1GQ495M9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
USH1GQ495M9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
USH1GQ495M9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.49■■□□□ 1.03
USH1GQ495M9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.49■■□□□ 1.03
USH1GQ495M9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
USH1GQ495M9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.49■■□□□ 1.03
USH1GQ495M9 VENTXP5-201ENST00000523979 775 ntBASIC21.49■■□□□ 1.03
USH1GQ495M9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.49■■□□□ 1.03
USH1GQ495M9 ZNF444P1-201ENST00000559497 298 ntBASIC21.49■■□□□ 1.03
USH1GQ495M9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 AP000550.4-202ENST00000639755 178 ntBASIC21.49■■□□□ 1.03
USH1GQ495M9 AC068587.9-201ENST00000641814 219 ntBASIC21.49■■□□□ 1.03
USH1GQ495M9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
USH1GQ495M9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.49■■□□□ 1.03
USH1GQ495M9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
USH1GQ495M9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.49■■□□□ 1.03
USH1GQ495M9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
USH1GQ495M9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.49■■□□□ 1.03
USH1GQ495M9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.49■■□□□ 1.03
USH1GQ495M9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USH1GQ495M9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USH1GQ495M9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
USH1GQ495M9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
USH1GQ495M9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USH1GQ495M9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USH1GQ495M9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
USH1GQ495M9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USH1GQ495M9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
USH1GQ495M9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USH1GQ495M9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USH1GQ495M9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
USH1GQ495M9 MIR564-202ENST00000385049 94 ntBASIC21.48■■□□□ 1.03
USH1GQ495M9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USH1GQ495M9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
USH1GQ495M9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.48■■□□□ 1.03
USH1GQ495M9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USH1GQ495M9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.48■■□□□ 1.03
USH1GQ495M9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.48■■□□□ 1.03
USH1GQ495M9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms