Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC6LQ2NKX8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC6LQ2NKX8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ERCC6LQ2NKX8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC6LQ2NKX8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC6LQ2NKX8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC6LQ2NKX8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC6LQ2NKX8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC6LQ2NKX8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 AC027612.3-201ENST00000413684 1047 ntBASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC6LQ2NKX8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 BCL2-203ENST00000589955 5011 ntBASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 KRT18P68-201ENST00000392293 1000 ntBASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 TERF1P2-201ENST00000583350 1212 ntBASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 UBE2DNL-204ENST00000602536 740 ntBASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC6LQ2NKX8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERCC6LQ2NKX8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms