Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.52■□□□□ 0.23
NKX6-1P78426 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NKX6-1P78426 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
NKX6-1P78426 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.52■□□□□ 0.23
NKX6-1P78426 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.51■□□□□ 0.23
NKX6-1P78426 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.51■□□□□ 0.23
NKX6-1P78426 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.51■□□□□ 0.23
NKX6-1P78426 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
NKX6-1P78426 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.51■□□□□ 0.23
NKX6-1P78426 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.51■□□□□ 0.23
NKX6-1P78426 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.51■□□□□ 0.23
NKX6-1P78426 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.51■□□□□ 0.23
NKX6-1P78426 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.51■□□□□ 0.23
NKX6-1P78426 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.51■□□□□ 0.23
NKX6-1P78426 AC010653.2-201ENST00000623505 997 ntBASIC16.51■□□□□ 0.23
NKX6-1P78426 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.51■□□□□ 0.23
NKX6-1P78426 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-1P78426 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NKX6-1P78426 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.51■□□□□ 0.23
NKX6-1P78426 IER3-202ENST00000376377 1350 ntBASIC16.51■□□□□ 0.23
NKX6-1P78426 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.51■□□□□ 0.23
NKX6-1P78426 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
NKX6-1P78426 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
NKX6-1P78426 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NKX6-1P78426 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NKX6-1P78426 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.5■□□□□ 0.23
NKX6-1P78426 AC026396.1-201ENST00000419388 421 ntBASIC16.5■□□□□ 0.23
NKX6-1P78426 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
NKX6-1P78426 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.5■□□□□ 0.23
NKX6-1P78426 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.5■□□□□ 0.23
NKX6-1P78426 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.5■□□□□ 0.23
NKX6-1P78426 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.5■□□□□ 0.23
NKX6-1P78426 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.5■□□□□ 0.23
NKX6-1P78426 AC141257.4-201ENST00000634557 245 ntBASIC16.5■□□□□ 0.23
NKX6-1P78426 AC136944.6-201ENST00000634818 245 ntBASIC16.5■□□□□ 0.23
NKX6-1P78426 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.5■□□□□ 0.23
NKX6-1P78426 AL031432.5-201ENST00000641059 760 ntBASIC16.5■□□□□ 0.23
NKX6-1P78426 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NKX6-1P78426 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NKX6-1P78426 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
NKX6-1P78426 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-1P78426 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NKX6-1P78426 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.5■□□□□ 0.23
NKX6-1P78426 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NKX6-1P78426 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.49■□□□□ 0.23
NKX6-1P78426 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
NKX6-1P78426 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 BX323043.1-201ENST00000641006 1765 ntBASIC16.49■□□□□ 0.23
NKX6-1P78426 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.49■□□□□ 0.23
NKX6-1P78426 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.49■□□□□ 0.23
NKX6-1P78426 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
NKX6-1P78426 KRT8P11-201ENST00000409686 1436 ntBASIC16.49■□□□□ 0.23
NKX6-1P78426 AL450487.1-201ENST00000426799 995 ntBASIC16.49■□□□□ 0.23
NKX6-1P78426 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.49■□□□□ 0.23
NKX6-1P78426 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NKX6-1P78426 FAM86EP-206ENST00000510506 987 ntBASIC16.49■□□□□ 0.23
NKX6-1P78426 PRSS44-201ENST00000515154 1146 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms