Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.3■□□□□ 0.52
YBX1P67809 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.3■□□□□ 0.52
YBX1P67809 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.29■□□□□ 0.52
YBX1P67809 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YBX1P67809 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
YBX1P67809 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.29■□□□□ 0.52
YBX1P67809 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
YBX1P67809 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.29■□□□□ 0.52
YBX1P67809 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
YBX1P67809 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.29■□□□□ 0.52
YBX1P67809 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
YBX1P67809 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.29■□□□□ 0.52
YBX1P67809 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.29■□□□□ 0.52
YBX1P67809 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.29■□□□□ 0.52
YBX1P67809 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YBX1P67809 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
YBX1P67809 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YBX1P67809 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.29■□□□□ 0.52
YBX1P67809 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YBX1P67809 AC090164.3-201ENST00000610780 2143 ntBASIC18.29■□□□□ 0.52
YBX1P67809 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YBX1P67809 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YBX1P67809 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YBX1P67809 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
YBX1P67809 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YBX1P67809 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.29■□□□□ 0.52
YBX1P67809 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
YBX1P67809 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.28■□□□□ 0.52
YBX1P67809 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.28■□□□□ 0.52
YBX1P67809 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.28■□□□□ 0.52
YBX1P67809 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.28■□□□□ 0.52
YBX1P67809 AC073912.3-201ENST00000624414 853 ntBASIC18.28■□□□□ 0.52
YBX1P67809 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
YBX1P67809 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.28■□□□□ 0.52
YBX1P67809 AC093525.10-201ENST00000625130 1569 ntBASIC18.28■□□□□ 0.52
YBX1P67809 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
YBX1P67809 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.28■□□□□ 0.52
YBX1P67809 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YBX1P67809 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.27■□□□□ 0.52
YBX1P67809 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
YBX1P67809 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.27■□□□□ 0.52
YBX1P67809 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
YBX1P67809 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
YBX1P67809 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
YBX1P67809 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
YBX1P67809 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
YBX1P67809 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
YBX1P67809 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
YBX1P67809 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.27■□□□□ 0.52
YBX1P67809 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
YBX1P67809 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
YBX1P67809 AC211429.1-201ENST00000415277 523 ntBASIC18.27■□□□□ 0.52
YBX1P67809 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
YBX1P67809 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
YBX1P67809 AC008622.2-201ENST00000617006 1229 ntBASIC18.27■□□□□ 0.52
YBX1P67809 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.27■□□□□ 0.52
YBX1P67809 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.27■□□□□ 0.52
YBX1P67809 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
YBX1P67809 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.27■□□□□ 0.51
YBX1P67809 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
YBX1P67809 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
YBX1P67809 BICD1-207ENST00000551848 1962 ntBASIC18.26■□□□□ 0.51
YBX1P67809 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.26■□□□□ 0.51
YBX1P67809 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.26■□□□□ 0.51
YBX1P67809 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.26■□□□□ 0.51
YBX1P67809 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
YBX1P67809 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.26■□□□□ 0.51
YBX1P67809 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms