Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CKS1BP61024 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.12□□□□□ -0.31
CKS1BP61024 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.12□□□□□ -0.31
CKS1BP61024 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CKS1BP61024 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.12□□□□□ -0.31
CKS1BP61024 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.12□□□□□ -0.31
CKS1BP61024 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 AC135050.7-201ENST00000624508 2218 ntBASIC13.12□□□□□ -0.31
CKS1BP61024 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.12□□□□□ -0.31
CKS1BP61024 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CKS1BP61024 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.12□□□□□ -0.31
CKS1BP61024 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.11□□□□□ -0.31
CKS1BP61024 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.11□□□□□ -0.31
CKS1BP61024 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
CKS1BP61024 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CKS1BP61024 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CKS1BP61024 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 PHGDH-210ENST00000641115 1638 ntBASIC13.11□□□□□ -0.31
CKS1BP61024 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.11□□□□□ -0.31
CKS1BP61024 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.11□□□□□ -0.31
CKS1BP61024 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.11□□□□□ -0.31
CKS1BP61024 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.11□□□□□ -0.31
CKS1BP61024 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.11□□□□□ -0.31
CKS1BP61024 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.11□□□□□ -0.31
CKS1BP61024 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.11□□□□□ -0.31
CKS1BP61024 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CKS1BP61024 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.11□□□□□ -0.31
CKS1BP61024 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.11□□□□□ -0.31
CKS1BP61024 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.11□□□□□ -0.31
CKS1BP61024 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CKS1BP61024 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 TCAF2P1-201ENST00000291129 2421 ntBASIC13.11□□□□□ -0.31
CKS1BP61024 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CKS1BP61024 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.11□□□□□ -0.31
CKS1BP61024 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
CKS1BP61024 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.11□□□□□ -0.31
CKS1BP61024 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.11□□□□□ -0.31
CKS1BP61024 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CKS1BP61024 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CKS1BP61024 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.1□□□□□ -0.31
CKS1BP61024 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
CKS1BP61024 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.1□□□□□ -0.31
CKS1BP61024 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CKS1BP61024 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 PTBP1P-201ENST00000554374 1601 ntBASIC13.1□□□□□ -0.31
CKS1BP61024 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.1□□□□□ -0.31
CKS1BP61024 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CKS1BP61024 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 KRT18P11-201ENST00000435214 1283 ntBASIC13.1□□□□□ -0.31
CKS1BP61024 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.1□□□□□ -0.31
CKS1BP61024 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.1□□□□□ -0.31
CKS1BP61024 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CKS1BP61024 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.1□□□□□ -0.31
CKS1BP61024 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.1□□□□□ -0.31
CKS1BP61024 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CKS1BP61024 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms