Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
DEFA3P59666 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
DEFA3P59666 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DEFA3P59666 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DEFA3P59666 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
DEFA3P59666 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
DEFA3P59666 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
DEFA3P59666 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.47■□□□□ 0.23
DEFA3P59666 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
DEFA3P59666 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
DEFA3P59666 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
DEFA3P59666 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
DEFA3P59666 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.47■□□□□ 0.23
DEFA3P59666 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
DEFA3P59666 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.47■□□□□ 0.23
DEFA3P59666 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.47■□□□□ 0.23
DEFA3P59666 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
DEFA3P59666 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.47■□□□□ 0.23
DEFA3P59666 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.47■□□□□ 0.23
DEFA3P59666 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.47■□□□□ 0.23
DEFA3P59666 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.47■□□□□ 0.23
DEFA3P59666 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.47■□□□□ 0.23
DEFA3P59666 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.47■□□□□ 0.23
DEFA3P59666 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.47■□□□□ 0.23
DEFA3P59666 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
DEFA3P59666 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DEFA3P59666 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DEFA3P59666 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.46■□□□□ 0.23
DEFA3P59666 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DEFA3P59666 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
DEFA3P59666 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DEFA3P59666 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DEFA3P59666 AC068587.6-202ENST00000641839 5619 ntBASIC16.46■□□□□ 0.23
DEFA3P59666 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
DEFA3P59666 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
DEFA3P59666 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.46■□□□□ 0.23
DEFA3P59666 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DEFA3P59666 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
DEFA3P59666 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DEFA3P59666 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.46■□□□□ 0.23
DEFA3P59666 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.46■□□□□ 0.23
DEFA3P59666 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DEFA3P59666 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.46■□□□□ 0.23
DEFA3P59666 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.46■□□□□ 0.23
DEFA3P59666 AC011298.3-201ENST00000615796 283 ntBASIC16.46■□□□□ 0.23
DEFA3P59666 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DEFA3P59666 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DEFA3P59666 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.46■□□□□ 0.23
DEFA3P59666 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.46■□□□□ 0.23
DEFA3P59666 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
DEFA3P59666 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DEFA3P59666 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
DEFA3P59666 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DEFA3P59666 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.46■□□□□ 0.22
DEFA3P59666 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
DEFA3P59666 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.46■□□□□ 0.22
DEFA3P59666 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
DEFA3P59666 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
DEFA3P59666 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
DEFA3P59666 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.46■□□□□ 0.22
DEFA3P59666 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.46■□□□□ 0.22
DEFA3P59666 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.46■□□□□ 0.22
DEFA3P59666 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
DEFA3P59666 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
DEFA3P59666 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.45■□□□□ 0.22
DEFA3P59666 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
DEFA3P59666 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.45■□□□□ 0.22
DEFA3P59666 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
DEFA3P59666 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.45■□□□□ 0.22
DEFA3P59666 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.45■□□□□ 0.22
DEFA3P59666 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.45■□□□□ 0.22
DEFA3P59666 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DEFA3P59666 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms