Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 ECEL1P2-202ENST00000465689 757 ntBASIC20.04■□□□□ 0.8
RAD23BP54727 AC145285.6-201ENST00000604632 637 ntBASIC20.04■□□□□ 0.8
RAD23BP54727 AC133561.5-201ENST00000635547 218 ntBASIC20.04■□□□□ 0.8
RAD23BP54727 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAD23BP54727 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAD23BP54727 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RAD23BP54727 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RAD23BP54727 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.04■□□□□ 0.8
RAD23BP54727 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAD23BP54727 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
RAD23BP54727 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.03■□□□□ 0.8
RAD23BP54727 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.03■□□□□ 0.8
RAD23BP54727 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAD23BP54727 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.03■□□□□ 0.8
RAD23BP54727 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAD23BP54727 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAD23BP54727 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAD23BP54727 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RAD23BP54727 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAD23BP54727 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAD23BP54727 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
RAD23BP54727 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.03■□□□□ 0.8
RAD23BP54727 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.03■□□□□ 0.8
RAD23BP54727 AC211429.1-201ENST00000415277 523 ntBASIC20.03■□□□□ 0.8
RAD23BP54727 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.03■□□□□ 0.8
RAD23BP54727 AC128688.1-201ENST00000487626 519 ntBASIC20.03■□□□□ 0.8
RAD23BP54727 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.03■□□□□ 0.8
RAD23BP54727 FAM87A-204ENST00000613235 858 ntBASIC20.03■□□□□ 0.8
RAD23BP54727 AC010653.2-201ENST00000623505 997 ntBASIC20.03■□□□□ 0.8
RAD23BP54727 AC097493.4-201ENST00000641197 219 ntBASIC20.03■□□□□ 0.8
RAD23BP54727 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.03■□□□□ 0.8
RAD23BP54727 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAD23BP54727 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAD23BP54727 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAD23BP54727 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.03■□□□□ 0.8
RAD23BP54727 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.02■□□□□ 0.8
RAD23BP54727 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RAD23BP54727 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAD23BP54727 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAD23BP54727 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.02■□□□□ 0.8
RAD23BP54727 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.02■□□□□ 0.8
RAD23BP54727 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAD23BP54727 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAD23BP54727 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAD23BP54727 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.02■□□□□ 0.8
RAD23BP54727 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.02■□□□□ 0.8
RAD23BP54727 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.02■□□□□ 0.8
RAD23BP54727 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAD23BP54727 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAD23BP54727 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAD23BP54727 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.02■□□□□ 0.8
RAD23BP54727 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAD23BP54727 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.02■□□□□ 0.8
RAD23BP54727 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.02■□□□□ 0.8
RAD23BP54727 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RAD23BP54727 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.79
RAD23BP54727 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAD23BP54727 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.02■□□□□ 0.79
RAD23BP54727 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAD23BP54727 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RAD23BP54727 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAD23BP54727 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.01■□□□□ 0.79
RAD23BP54727 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.01■□□□□ 0.79
RAD23BP54727 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RAD23BP54727 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.01■□□□□ 0.79
RAD23BP54727 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.01■□□□□ 0.79
RAD23BP54727 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.01■□□□□ 0.79
RAD23BP54727 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAD23BP54727 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAD23BP54727 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RAD23BP54727 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAD23BP54727 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.01■□□□□ 0.79
RAD23BP54727 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.01■□□□□ 0.79
RAD23BP54727 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
RAD23BP54727 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAD23BP54727 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAD23BP54727 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.01■□□□□ 0.79
RAD23BP54727 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RAD23BP54727 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAD23BP54727 MTMR9LP-203ENST00000426597 1545 ntBASIC20.01■□□□□ 0.79
RAD23BP54727 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RAD23BP54727 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.01■□□□□ 0.79
RAD23BP54727 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.01■□□□□ 0.79
RAD23BP54727 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.01■□□□□ 0.79
RAD23BP54727 KRT18P22-201ENST00000402024 1347 ntBASIC20.01■□□□□ 0.79
RAD23BP54727 AL109659.2-201ENST00000606809 1674 ntBASIC20■□□□□ 0.79
RAD23BP54727 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAD23BP54727 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20■□□□□ 0.79
RAD23BP54727 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAD23BP54727 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20■□□□□ 0.79
RAD23BP54727 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAD23BP54727 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20■□□□□ 0.79
RAD23BP54727 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAD23BP54727 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAD23BP54727 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20■□□□□ 0.79
RAD23BP54727 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAD23BP54727 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20■□□□□ 0.79
RAD23BP54727 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20■□□□□ 0.79
RAD23BP54727 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20■□□□□ 0.79
RAD23BP54727 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms