Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.92■□□□□ 0.62
LIMK2P53671 MIR6786-201ENST00000616843 113 ntBASIC18.92■□□□□ 0.62
LIMK2P53671 AL031985.4-201ENST00000642138 673 ntBASIC18.92■□□□□ 0.62
LIMK2P53671 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.92■□□□□ 0.62
LIMK2P53671 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.92■□□□□ 0.62
LIMK2P53671 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LIMK2P53671 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
LIMK2P53671 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.92■□□□□ 0.62
LIMK2P53671 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LIMK2P53671 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 BICD1-207ENST00000551848 1962 ntBASIC18.92■□□□□ 0.62
LIMK2P53671 KRT8P9-201ENST00000558927 1449 ntBASIC18.91■□□□□ 0.62
LIMK2P53671 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.91■□□□□ 0.62
LIMK2P53671 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMK2P53671 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMK2P53671 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LIMK2P53671 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LIMK2P53671 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LIMK2P53671 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LIMK2P53671 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.91■□□□□ 0.62
LIMK2P53671 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.91■□□□□ 0.62
LIMK2P53671 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LIMK2P53671 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMK2P53671 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
LIMK2P53671 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.91■□□□□ 0.62
LIMK2P53671 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.91■□□□□ 0.62
LIMK2P53671 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.91■□□□□ 0.62
LIMK2P53671 FITM1-202ENST00000559294 800 ntBASIC18.91■□□□□ 0.62
LIMK2P53671 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.91■□□□□ 0.62
LIMK2P53671 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LIMK2P53671 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LIMK2P53671 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LIMK2P53671 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LIMK2P53671 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMK2P53671 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMK2P53671 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
LIMK2P53671 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.91■□□□□ 0.62
LIMK2P53671 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMK2P53671 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMK2P53671 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.91■□□□□ 0.62
LIMK2P53671 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.9■□□□□ 0.62
LIMK2P53671 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
LIMK2P53671 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMK2P53671 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.9■□□□□ 0.62
LIMK2P53671 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.9■□□□□ 0.62
LIMK2P53671 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMK2P53671 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMK2P53671 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMK2P53671 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMK2P53671 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.9■□□□□ 0.62
LIMK2P53671 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LIMK2P53671 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMK2P53671 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMK2P53671 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.9■□□□□ 0.62
LIMK2P53671 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.9■□□□□ 0.62
LIMK2P53671 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.9■□□□□ 0.62
LIMK2P53671 AL445675.2-201ENST00000620291 557 ntBASIC18.9■□□□□ 0.62
LIMK2P53671 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LIMK2P53671 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMK2P53671 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.9■□□□□ 0.62
LIMK2P53671 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMK2P53671 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LIMK2P53671 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.9■□□□□ 0.62
LIMK2P53671 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LIMK2P53671 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LIMK2P53671 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.9■□□□□ 0.62
LIMK2P53671 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.9■□□□□ 0.62
LIMK2P53671 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LIMK2P53671 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
LIMK2P53671 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LIMK2P53671 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
LIMK2P53671 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LIMK2P53671 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.89■□□□□ 0.61
LIMK2P53671 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.89■□□□□ 0.61
LIMK2P53671 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.89■□□□□ 0.61
LIMK2P53671 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.89■□□□□ 0.61
LIMK2P53671 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LIMK2P53671 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LIMK2P53671 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LIMK2P53671 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LIMK2P53671 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LIMK2P53671 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LIMK2P53671 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LIMK2P53671 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LIMK2P53671 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LIMK2P53671 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LIMK2P53671 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
LIMK2P53671 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LIMK2P53671 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.88■□□□□ 0.61
LIMK2P53671 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LIMK2P53671 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIMK2P53671 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms